Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815379.1_cds_XP_016498295.1_12340
CDS Infomation

[gene=LOC107817039] [db_xref=GeneID:107817039] [protein=pentatricopeptide repeat-containing protein At4g25270, chloroplastic-like] [protein_id=XP_016498295.1] [location=complement(join(5931..7100,7194..7661))] [gbkey=CDS]
Sequence

ATGGAGATAATGGCTCTGCCATTGCAGCAAAACATTTCCATTAGCATTAATTTCAGATCT
CCCTATCCCTGTGCAAAATCCGCATACCCAACTTTCTCTTTTACAAACGAAAACACAAAA
ATTAGGAAACTGCAAAATCCAAAACAGACTTGGGTAAACCGTAAAACCCACATCAGTCTT
CCAAAATCACGCCAAAACCAGCTGGTTTTCAATCAAAGAAGCCCTCCCAAAACCAAGCTT
GAAGCTCTTGAAACTGTCATCACTAAATTAGAGTCTACAGTAAATAATGGCACTGAGGTT
AACGACCCACAAATCTTCGCTTCCCTTTTAGAAACATGCTTTAATTTACAGGCTATTGAT
CATGGTATCCGTGTTCATCGGCTCATCCCCGAGAAACTTTTACGTAAAAACGTTGGCATT
TCATCCAAACTGATAAGGCTTTATGCGTGTAGTGGACAAACCCAGAAGGCACATGAACTG
TTTGATAAAATGCCAAAGAGAAATGCCTCAGCATTTCCTTGGAATTCGATTATATCTGGC
TATGCTGAGAATGGCTTGTTTGAAGATGCGCTGGCAATTTATTTTCAGATGGTGGAGGAG
GGTGTGGAGCCTGATTGTTACACTTTCCCACGTGCGTTGAAGGCATGTGGAGGAGTTGGG
TTGATTCATGTAGGAGAGGAAGTTCATCGGCATGTGATTCGTCGTGGGTTGGAAAGTAAT
GGGTTTATTTTAAACGCGCTTGTTGATATGTACGCCAAATGTGGTGATATCGTTAAGGCT
CGGAAACTCTTTGATCAAATTGGGACAAAAGATTTGGTTTCTTGGAATTCAATGCTCATC
GGATACATTAGGCATGAGCTTATTAGTGAGGCGTTCAACTTGTTTCGTCTTATGATACGT
GATGGAATATTACCTGACTCTGTCTCTATATCAGCATTACTTGTGGCCAGATTACCTTTC
TCAATTGGTAAACAAATTCATGGATGGGTTCTTCGTCGAGGGACTAATCAAGAATTGTCT
GTTGTTAACTCTTTGGTTGACTTCTATTCGGACCAAAAAAAGTTGAAGCAAGTGCGATGG
TTATTTGAACATATGCACGAACGAGATGTGGTATCATGGAATTCGGTCATTTCAGCTCAC
TCTAAGCACCCTGAAGCTCTATCGTACTTTGAGAAGATGGTGAAATTTGGTGCCGCACCA
GATGGAGTTACATTTGTGTCATTGCTGTCGACTTGTGCTCATTTAGGGAAACTAGAGGAT
GGGGAGAGGTTGTTTAGAATAATGAAAGAGAGGTATGATATTAGTCCAAGGATGGAACAT
TATAGTTGTATGGTGAATCTATATGGAAGGATAGGATTGATAGACAAAGCTTTTGATTTA
GTAATGAAGAGAATGGAATTTGAAGCTGGACCAACCATTTGGGGTGCACTGTTATATGCT
TGCTACAGACATAGCAATGTTAAAATAGGAGAGATAGCTGCGGAACGTCTGTTCGAGTTG
GAACCAGATAATGAGCATAATTTTGAACTTTTGATGAAGATTTACAACAATGCTGGTCTA
CTAGAGGATGTAAAGAGAATAAAGCTAATGATGGTAGAACGAGGATTAGATACTTCGATA
CCATACAAAAGATGTTAA

Peptide Sequence

PEP ID

XP_016498295.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g25270, chloroplastic-like [Nicotiana tabacum]
Sequence

MEIMALPLQQNISISINFRSPYPCAKSAYPTFSFTNENTKIRKLQNPKQTWVNRKTHISL
PKSRQNQLVFNQRSPPKTKLEALETVITKLESTVNNGTEVNDPQIFASLLETCFNLQAID
HGIRVHRLIPEKLLRKNVGISSKLIRLYACSGQTQKAHELFDKMPKRNASAFPWNSIISG
YAENGLFEDALAIYFQMVEEGVEPDCYTFPRALKACGGVGLIHVGEEVHRHVIRRGLESN
GFILNALVDMYAKCGDIVKARKLFDQIGTKDLVSWNSMLIGYIRHELISEAFNLFRLMIR
DGILPDSVSISALLVARLPFSIGKQIHGWVLRRGTNQELSVVNSLVDFYSDQKKLKQVRW
LFEHMHERDVVSWNSVISAHSKHPEALSYFEKMVKFGAAPDGVTFVSLLSTCAHLGKLED
GERLFRIMKERYDISPRMEHYSCMVNLYGRIGLIDKAFDLVMKRMEFEAGPTIWGALLYA
CYRHSNVKIGEIAAERLFELEPDNEHNFELLMKIYNNAGLLEDVKRIKLMMVERGLDTSI
PYKRC

Transcript Sequence

Gene sequence data has not been registered.